BloodPAC
Cancer Moonshot - BloodPAC

Data Group

BloodPAC

Data Applications

BloodPAC data applications are simple applications that call the BloodPAC commons API and create customized queries of submission metadata.   Access is granted to members and requires a username and password.  Contact the support team to learn more or request customized content.  

Data Matrices

Matrices (python, graphql) on github:  https://github.com/occ-data/bpa-matrices

Interactive MetaData Explorer

ShinyR (python, R, shiny, graphql) on github:  https://github.com/occ-data/bpa-shinyapp

 


blood_atlas_08.2017.png

Data Model

To facilitate a common set of standards and the use of tools for analysis, a data model has been developed for this project. We will work to make the data model as close to the Genomic Data Commons (gdc.cancer.gov) data model and as compliant to the GA4GH standards as practical.  https://github.com/occ-data/bpadictionary

Changes and extensions to the data model are adjudicated by the Data Modelers Working Group.   Proposals are tracked here:  http://bit.ly/DataModel_IssueManagement

Directions for Uploading Data

For all members planning to contribute data, please review the Data Contribution Wiki below.

Data Contribution Wiki

MetaData Format

Pre-Submission Data Inventory

For use prior to full submission. 

FAQ